Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
LPIPGHJE_10.01.00.0
LPIPGHJE_20.01.00.0
LPIPGHJE_30.01.00.0
LPIPGHJE_40.01.00.0
LPIPGHJE_50.01.00.0
LPIPGHJE_60.01.00.0
LPIPGHJE_70.01.00.0
LPIPGHJE_80.01.00.0
LPIPGHJE_90.01.00.0
LPIPGHJE_100.01.00.0
LPIPGHJE_110.01.00.0
LPIPGHJE_120.01.00.0
LPIPGHJE_130.01.00.0
LPIPGHJE_140.01.00.0
LPIPGHJE_150.01.00.0
LPIPGHJE_160.01.00.0
LPIPGHJE_170.01.00.0
LPIPGHJE_180.01.00.0
LPIPGHJE_190.01.00.0
LPIPGHJE_200.01.00.0
LPIPGHJE_210.01.00.0
LPIPGHJE_220.01.00.0
LPIPGHJE_230.01.00.0
LPIPGHJE_240.01.00.0
LPIPGHJE_251.00.01.0
LPIPGHJE_260.01.00.0
LPIPGHJE_270.01.00.0
LPIPGHJE_280.01.00.0
LPIPGHJE_290.01.00.0
LPIPGHJE_300.01.00.0
LPIPGHJE_310.01.00.0
LPIPGHJE_320.01.00.0
LPIPGHJE_330.01.00.0
LPIPGHJE_340.01.00.0
LPIPGHJE_350.01.00.0
LPIPGHJE_360.01.00.0
LPIPGHJE_370.01.00.0
LPIPGHJE_380.01.00.0
LPIPGHJE_390.01.00.0
LPIPGHJE_400.01.00.0
LPIPGHJE_410.01.00.0
LPIPGHJE_420.01.00.0
LPIPGHJE_430.01.00.0
LPIPGHJE_440.01.00.0
LPIPGHJE_450.01.00.0
LPIPGHJE_460.01.00.0
LPIPGHJE_470.01.00.0
LPIPGHJE_480.01.00.0
LPIPGHJE_490.01.00.0
LPIPGHJE_500.01.00.0
LPIPGHJE_510.01.00.0
LPIPGHJE_520.01.00.0
LPIPGHJE_530.01.00.0
LPIPGHJE_540.01.00.0
LPIPGHJE_550.01.00.0
LPIPGHJE_560.01.00.0
LPIPGHJE_570.01.00.0
LPIPGHJE_581.00.01.0
LPIPGHJE_590.01.00.0
LPIPGHJE_601.00.01.0
LPIPGHJE_611.00.01.0
LPIPGHJE_620.01.00.0
LPIPGHJE_630.01.00.0
LPIPGHJE_641.00.01.0
LPIPGHJE_650.01.00.0
LPIPGHJE_660.01.00.0
LPIPGHJE_670.01.00.0
LPIPGHJE_680.01.00.0
LPIPGHJE_691.00.01.0
LPIPGHJE_700.01.00.0
LPIPGHJE_710.01.00.0
LPIPGHJE_720.01.00.0
LPIPGHJE_730.01.00.0
LPIPGHJE_741.00.01.0
LPIPGHJE_750.01.00.0
LPIPGHJE_760.01.00.0
LPIPGHJE_770.01.00.0
LPIPGHJE_781.00.01.0
LPIPGHJE_790.01.00.0
LPIPGHJE_801.00.01.0
LPIPGHJE_811.00.01.0
LPIPGHJE_821.00.01.0
LPIPGHJE_830.01.00.0
LPIPGHJE_841.00.01.0
LPIPGHJE_850.01.00.0
LPIPGHJE_860.01.00.0
LPIPGHJE_870.01.00.0
LPIPGHJE_880.01.00.0
LPIPGHJE_890.01.00.0
LPIPGHJE_901.00.01.0
LPIPGHJE_910.01.00.0
LPIPGHJE_921.00.01.0
LPIPGHJE_930.01.00.0
LPIPGHJE_940.01.00.0
LPIPGHJE_950.01.00.0
LPIPGHJE_961.00.01.0
LPIPGHJE_971.00.01.0
LPIPGHJE_981.00.01.0
LPIPGHJE_991.00.01.0
LPIPGHJE_1001.00.01.0
LPIPGHJE_1010.01.00.0
LPIPGHJE_1020.01.00.0
LPIPGHJE_1030.01.00.0
LPIPGHJE_1041.00.01.0
LPIPGHJE_1051.00.01.0
LPIPGHJE_1061.00.01.0
LPIPGHJE_1071.00.01.0
LPIPGHJE_1080.01.00.0
LPIPGHJE_1091.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
No hit found

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements