Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ILNCFFLE_87 | 502 | 2421 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ILNCFFLE_87 | 502 | 2421 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ILNCFFLE_87 | 502 | 2418 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ILNCFFLE_1 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_2 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_3 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_4 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_5 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_6 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_7 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_8 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_9 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_10 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_11 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_12 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_13 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_14 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_15 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_16 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_17 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_18 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_19 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_20 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_21 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_22 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_23 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_24 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_25 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_26 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_27 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_28 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_29 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_30 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_31 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_32 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_33 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_34 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_35 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_36 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_37 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_38 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_39 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_40 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_41 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_42 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_43 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_44 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_45 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_46 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_47 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_48 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_49 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_50 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_51 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_52 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_53 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_54 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_55 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_56 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_57 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_58 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_59 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_60 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_61 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_62 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_63 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_64 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_65 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_66 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_67 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_68 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_69 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_70 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_71 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_72 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_73 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_74 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_75 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_76 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_77 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_78 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_79 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_80 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_81 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_82 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_83 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_84 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_85 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_86 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_87 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_88 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_89 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_90 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_91 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_92 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_93 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_94 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_95 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_96 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_97 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_98 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_99 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_100 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_101 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_102 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_103 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_104 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_105 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_106 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_107 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_108 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_109 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_110 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_111 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_112 | 1.0 | 0.0 | 1.0 |
| ILNCFFLE_113 | 0.0 | 1.0 | 0.0 |
| ILNCFFLE_114 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ILNCFFLE_24 | 2020 | 29844 | False | Siphoviridae | VOG6818, |
Phigaro v2.4.0 (Database: Jan. 2024 release)