Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 0 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PCEAOPAN_17 | 66526 | 67428 | cepA | ARO:3003559 | cepA | 99.33 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PCEAOPAN_17 | 66526 | 67428 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PCEAOPAN_17 | 66529 | 67428 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.33 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| PCEAOPAN_1 | 59198 | 60391 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| PCEAOPAN_1 | 59198 | 60391 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| PCEAOPAN_1 | 59198 | 60391 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PCEAOPAN_1 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_2 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_3 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_4 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_5 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_6 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_7 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_8 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_9 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_10 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_11 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_12 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_13 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_14 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_15 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_16 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_17 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_18 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_19 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_20 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_21 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_22 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_23 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_24 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_25 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_26 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_27 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_28 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_29 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_30 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_31 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_32 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_33 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_34 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_35 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_36 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_37 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_38 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_39 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_40 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_41 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_42 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_43 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_44 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_45 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_46 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_47 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_48 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_49 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_50 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_51 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_52 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_53 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_54 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_55 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_56 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_57 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_58 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_59 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_60 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_61 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_62 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_63 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_64 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_65 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_66 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_67 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_68 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_69 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_70 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_71 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_72 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_73 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_74 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_75 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_76 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_77 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_78 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_79 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_80 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_81 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_82 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_83 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_84 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_85 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_86 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_87 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_88 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_89 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_90 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_91 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_92 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_93 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_94 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_95 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_96 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_97 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_98 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_99 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_100 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_101 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_102 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_103 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_104 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_105 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_106 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_107 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_108 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_109 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_110 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_111 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_112 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_113 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_114 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_115 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_116 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_117 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_118 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_119 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_120 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_123 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_124 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_125 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_127 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_128 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_129 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_130 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_131 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_132 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_134 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_135 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_137 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_138 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_139 | 0.0 | 1.0 | 0.0 |
| PCEAOPAN_140 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_141 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_142 | 1.0 | 0.0 | 1.0 |
| PCEAOPAN_144 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PCEAOPAN_20 | 14522 | 30746 | False | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)