Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 0 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DKMGDIHI_23 | 66513 | 67415 | cepA | ARO:3003559 | cepA | 99.33 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DKMGDIHI_23 | 66513 | 67415 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DKMGDIHI_23 | 66516 | 67415 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.33 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DKMGDIHI_15 | 58971 | 60164 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| DKMGDIHI_15 | 58971 | 60164 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| DKMGDIHI_15 | 58971 | 60164 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DKMGDIHI_1 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_2 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_3 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_4 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_5 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_6 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_7 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_8 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_9 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_10 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_11 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_12 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_13 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_14 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_15 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_16 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_17 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_18 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_19 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_20 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_21 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_22 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_23 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_24 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_25 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_26 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_27 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_28 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_29 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_30 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_31 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_32 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_33 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_34 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_35 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_36 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_37 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_38 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_39 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_40 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_41 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_42 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_43 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_44 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_45 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_46 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_47 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_48 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_49 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_50 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_51 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_52 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_53 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_54 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_55 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_56 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_57 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_58 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_59 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_60 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_61 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_62 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_63 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_64 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_65 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_66 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_67 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_68 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_69 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_70 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_71 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_72 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_73 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_74 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_75 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_76 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_77 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_78 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_79 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_80 | 1.0 | 0.0 | 1.0 |
| DKMGDIHI_81 | 0.0 | 1.0 | 0.0 |
| DKMGDIHI_82 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)