Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OICKCHHF_90 | 275 | 2200 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OICKCHHF_90 | 275 | 2200 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OICKCHHF_90 | 275 | 2197 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OICKCHHF_24 | 31734 | 30154 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OICKCHHF_1 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_2 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_3 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_4 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_5 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_6 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_7 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_8 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_9 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_10 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_11 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_12 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_13 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_14 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_15 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_16 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_17 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_18 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_19 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_20 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_21 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_22 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_23 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_24 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_25 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_26 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_27 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_28 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_29 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_30 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_31 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_32 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_33 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_34 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_35 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_36 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_37 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_38 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_39 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_40 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_41 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_42 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_43 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_44 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_45 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_46 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_47 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_48 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_49 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_50 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_51 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_52 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_53 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_54 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_55 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_56 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_57 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_58 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_59 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_60 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_61 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_62 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_63 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_64 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_65 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_66 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_67 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_68 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_69 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_70 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_71 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_72 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_73 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_74 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_75 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_76 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_77 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_78 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_79 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_80 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_81 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_82 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_83 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_84 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_85 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_86 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_87 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_88 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_89 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_90 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_91 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_92 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_93 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_94 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_95 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_96 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_97 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_98 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_99 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_100 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_101 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_102 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_103 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_104 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_105 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_106 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_107 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_108 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_109 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_110 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_111 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_112 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_113 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_114 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_115 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_116 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_117 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_118 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_119 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_120 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_121 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_122 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_123 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_124 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_125 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_126 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_127 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_128 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_129 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_130 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_131 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_132 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_133 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_134 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_135 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_136 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_137 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_138 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_139 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_140 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_141 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_142 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_143 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_144 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_145 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_146 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_147 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_148 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_149 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_150 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_151 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_152 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_153 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_154 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_155 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_156 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_157 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_159 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_160 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_161 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_162 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_163 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_164 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_165 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_166 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_167 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_168 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_169 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_170 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_171 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_172 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_173 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_174 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_175 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_176 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_177 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_178 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_180 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_181 | 1.0 | 0.0 | 1.0 |
| OICKCHHF_182 | 0.0 | 1.0 | 0.0 |
| OICKCHHF_183 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)