Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EJHMKEPD_70 | 275 | 2200 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EJHMKEPD_70 | 275 | 2200 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EJHMKEPD_70 | 275 | 2197 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EJHMKEPD_1 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_2 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_3 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_4 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_5 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_6 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_7 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_8 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_9 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_10 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_11 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_12 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_13 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_14 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_15 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_16 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_17 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_18 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_19 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_20 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_21 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_22 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_23 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_24 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_25 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_26 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_27 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_28 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_29 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_30 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_31 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_32 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_33 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_34 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_35 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_36 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_37 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_38 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_39 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_40 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_41 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_42 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_43 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_44 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_45 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_46 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_47 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_48 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_49 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_50 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_51 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_52 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_53 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_54 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_55 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_56 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_57 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_58 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_59 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_60 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_61 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_62 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_63 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_64 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_65 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_66 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_67 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_68 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_69 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_70 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_71 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_72 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_73 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_74 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_75 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_76 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_77 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_78 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_79 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_80 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_81 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_82 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_83 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_84 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_85 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_86 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_87 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_88 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_89 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_90 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_91 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_92 | 1.0 | 0.0 | 1.0 |
| EJHMKEPD_93 | 0.0 | 1.0 | 0.0 |
| EJHMKEPD_94 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)