Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONCFOMOD_14 | 63862 | 64764 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ONCFOMOD_14 | 63862 | 64764 | cepA | Unknown Beta-lactam | 100.00 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ONCFOMOD_14 | 63865 | 64764 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ONCFOMOD_1 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_2 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_3 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_4 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_5 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_6 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_7 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_8 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_9 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_10 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_11 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_12 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_13 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_14 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_15 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_16 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_17 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_18 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_19 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_20 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_21 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_22 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_23 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_24 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_25 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_26 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_27 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_28 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_29 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_30 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_31 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_32 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_33 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_34 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_35 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_36 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_37 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_38 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_39 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_40 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_41 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_42 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_43 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_44 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_45 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_46 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_47 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_48 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_49 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_50 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_51 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_52 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_53 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_54 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_55 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_56 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_57 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_58 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_59 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_60 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_61 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_62 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_63 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_64 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_65 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_66 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_67 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_68 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_69 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_70 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_71 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_72 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_73 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_74 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_75 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_76 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_77 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_78 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_79 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_80 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_81 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_82 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_83 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_84 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_85 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_86 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_87 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_88 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_89 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_90 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_91 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_92 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_93 | 1.0 | 0.0 | 1.0 |
| ONCFOMOD_94 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_95 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_96 | 0.0 | 1.0 | 0.0 |
| ONCFOMOD_97 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ONCFOMOD_17 | 44479 | 55611 | False | Siphoviridae | VOG4581, |
Phigaro v2.4.0 (Database: Jan. 2024 release)