Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PMHEFGJD_1 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_2 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_3 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_4 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_5 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_6 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_7 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_8 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_9 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_10 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_11 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_12 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_13 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_14 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_15 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_16 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_17 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_18 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_19 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_20 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_21 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_22 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_23 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_24 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_25 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_26 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_27 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_28 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_29 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_30 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_31 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_32 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_33 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_34 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_35 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_36 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_37 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_38 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_39 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_40 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_41 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_42 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_43 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_44 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_45 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_46 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_47 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_48 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_49 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_50 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_51 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_52 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_53 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_54 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_55 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_56 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_57 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_58 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_59 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_60 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_61 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_62 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_63 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_64 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_65 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_66 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_67 | 1.0 | 0.0 | 1.0 |
| PMHEFGJD_68 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_69 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_70 | 1.0 | 0.0 | 1.0 |
| PMHEFGJD_71 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_72 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_73 | 1.0 | 0.0 | 1.0 |
| PMHEFGJD_74 | 0.0 | 1.0 | 0.0 |
| PMHEFGJD_75 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PMHEFGJD_53 | 6811 | 13666 | False | Siphoviridae | VOG4589, |
Phigaro v2.4.0 (Database: Jan. 2024 release)