Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HCAEOLLB_17 | 92306 | 93106 | ErmF | ARO:3000498 | ErmF | 99.25 | 100.00 | M17124.1 |
| HCAEOLLB_17 | 90200 | 91063 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HCAEOLLB_17 | 92306 | 93106 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HCAEOLLB_17 | 90200 | 91060 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| HCAEOLLB_17 | 92309 | 93106 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HCAEOLLB_1 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_2 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_3 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_4 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_5 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_6 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_7 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_8 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_9 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_10 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_11 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_12 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_13 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_14 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_15 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_16 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_17 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_18 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_19 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_20 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_21 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_22 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_23 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_24 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_25 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_26 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_27 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_28 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_29 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_30 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_31 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_32 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_33 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_34 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_35 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_36 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_37 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_38 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_39 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_40 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_41 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_42 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_43 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_44 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_45 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_46 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_47 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_48 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_49 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_50 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_51 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_52 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_53 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_54 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_55 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_56 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_57 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_58 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_59 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_60 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_61 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_62 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_63 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_64 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_65 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_66 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_67 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_68 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_69 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_70 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_71 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_72 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_73 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_74 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_75 | 0.0 | 1.0 | 0.0 |
| HCAEOLLB_76 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_77 | 1.0 | 0.0 | 1.0 |
| HCAEOLLB_78 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HCAEOLLB_20 | 10477 | 21352 | False | Siphoviridae | VOG3992, |
| HCAEOLLB_59 | 16558 | 27457 | False | Siphoviridae | VOG0720, |
Phigaro v2.4.0 (Database: Jan. 2024 release)