Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIOFLGIC_10 | 9945 | 10835 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
| OIOFLGIC_42 | 2228 | 3193 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OIOFLGIC_42 | 2228 | 3193 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OIOFLGIC_42 | 2228 | 3190 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| OIOFLGIC_10 | 9948 | 10835 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OIOFLGIC_1 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_2 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_3 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_4 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_5 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_6 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_7 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_8 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_9 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_10 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_11 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_12 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_13 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_14 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_15 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_16 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_17 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_18 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_19 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_20 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_21 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_22 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_23 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_24 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_25 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_26 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_27 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_28 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_29 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_30 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_31 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_32 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_33 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_34 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_35 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_36 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_37 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_38 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_39 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_40 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_41 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_42 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_43 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_44 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_45 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_46 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_47 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_48 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_49 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_50 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_51 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_52 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_53 | 0.0 | 1.0 | 0.0 |
| OIOFLGIC_54 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_55 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_56 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_57 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_59 | 1.0 | 0.0 | 1.0 |
| OIOFLGIC_60 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)