Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LHDHOLGL_25 | 3532 | 4422 | CblA-1 | ARO:3002999 | CblA-1 | 97.64 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LHDHOLGL_25 | 3535 | 4422 | cblA | CblA family class A beta-lactamase | BLASTX | 97.64 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LHDHOLGL_1 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_2 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_3 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_4 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_5 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_6 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_7 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_8 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_9 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_10 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_11 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_12 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_13 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_14 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_15 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_16 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_17 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_18 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_19 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_20 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_21 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_22 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_23 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_24 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_25 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_26 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_27 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_28 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_29 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_30 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_31 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_32 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_33 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_34 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_35 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_36 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_37 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_38 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_39 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_40 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_41 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_42 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_43 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_44 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_45 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_46 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_47 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_48 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_49 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_50 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_51 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_52 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_53 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_54 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_55 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_56 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_57 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_58 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_59 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_60 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_61 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_62 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_63 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_64 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_65 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_66 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_67 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_68 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_69 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_70 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_71 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_72 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_73 | 0.0 | 1.0 | 0.0 |
| LHDHOLGL_74 | 1.0 | 0.0 | 1.0 |
| LHDHOLGL_75 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)