Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HENPGMAO_14 | 62632 | 61052 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HENPGMAO_1 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_2 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_3 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_4 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_5 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_6 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_7 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_8 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_9 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_10 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_11 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_12 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_13 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_14 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_15 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_16 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_17 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_18 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_19 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_20 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_21 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_22 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_23 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_24 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_25 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_26 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_27 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_28 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_29 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_30 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_31 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_32 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_33 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_34 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_35 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_36 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_37 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_38 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_39 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_40 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_41 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_42 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_43 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_44 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_45 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_46 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_47 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_48 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_49 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_50 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_51 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_52 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_53 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_54 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_55 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_56 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_57 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_58 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_59 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_60 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_61 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_62 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_63 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_64 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_65 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_66 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_67 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_68 | 1.0 | 0.0 | 1.0 |
| HENPGMAO_69 | 1.0 | 0.0 | 1.0 |
| HENPGMAO_70 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_71 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_72 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_73 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_74 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_75 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_76 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_77 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_78 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_79 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_80 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_81 | 1.0 | 0.0 | 1.0 |
| HENPGMAO_82 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_83 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_84 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_85 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_86 | 0.0 | 1.0 | 0.0 |
| HENPGMAO_87 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HENPGMAO_1 | 171343 | 180139 | False | Siphoviridae | VOG0720, |
| HENPGMAO_4 | 10277 | 13466 | False | Myoviridae | VOG0189, |
Phigaro v2.4.0 (Database: Jan. 2024 release)