Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKILGFJP_4 | 28548 | 29753 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| NKILGFJP_73 | 5645 | 6508 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| NKILGFJP_73 | 4333 | 5469 | tet(X) | ARO:3000205 | tet(X) | 99.21 | 97.42 | M37699.1 |
| NKILGFJP_73 | 2995 | 4134 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| NKILGFJP_73 | 1889 | 2689 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NKILGFJP_73 | 1889 | 2689 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| NKILGFJP_73 | 4303 | 5469 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKILGFJP_73 | 5645 | 6505 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| NKILGFJP_73 | 2995 | 4131 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| NKILGFJP_73 | 4303 | 5466 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| NKILGFJP_73 | 1892 | 2689 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| NKILGFJP_4 | 29778 | 30287 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| NKILGFJP_4 | 28548 | 29750 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NKILGFJP_67 | 6506 | 4926 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NKILGFJP_1 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_2 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_3 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_4 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_5 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_6 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_7 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_8 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_9 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_10 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_11 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_12 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_13 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_14 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_15 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_16 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_17 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_18 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_19 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_20 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_21 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_22 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_23 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_24 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_25 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_26 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_27 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_28 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_29 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_30 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_31 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_32 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_33 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_34 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_35 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_36 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_37 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_38 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_39 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_40 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_41 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_42 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_43 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_44 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_45 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_46 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_47 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_48 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_49 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_50 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_51 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_52 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_53 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_54 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_55 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_56 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_57 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_58 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_59 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_60 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_61 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_62 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_63 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_64 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_65 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_66 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_67 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_68 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_69 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_70 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_71 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_72 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_73 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_74 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_75 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_76 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_77 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_78 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_79 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_80 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_81 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_82 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_83 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_84 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_85 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_86 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_87 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_88 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_89 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_90 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_91 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_92 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_93 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_94 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_95 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_96 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_97 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_98 | 1.0 | 0.0 | 1.0 |
| NKILGFJP_99 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_100 | 0.0 | 1.0 | 0.0 |
| NKILGFJP_101 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)