Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GOCHANPE_15 | 1488 | 259 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.10 | 75.23 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GOCHANPE_1 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_2 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_3 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_4 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_5 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_6 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_7 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_8 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_9 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_10 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_11 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_12 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_13 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_14 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_15 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_16 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_17 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_18 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_19 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_20 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_21 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_22 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_23 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_24 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_25 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_26 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_27 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_28 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_29 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_30 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_31 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_32 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_33 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_34 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_35 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_36 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_37 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_38 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_39 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_40 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_41 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_42 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_43 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_44 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_45 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_46 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_47 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_48 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_49 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_50 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_51 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_52 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_53 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_54 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_55 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_56 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_57 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_58 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_59 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_60 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_61 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_62 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_63 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_64 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_65 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_66 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_67 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_68 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_69 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_70 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_71 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_72 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_73 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_74 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_75 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_76 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_77 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_78 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_79 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_80 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_81 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_82 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_83 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_84 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_85 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_86 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_87 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_88 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_89 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_90 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_91 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_92 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_93 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_94 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_95 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_96 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_97 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_98 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_99 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_100 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_101 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_102 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_103 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_104 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_105 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_106 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_107 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_108 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_109 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_110 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_111 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_112 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_113 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_114 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_115 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_116 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_117 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_118 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_119 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_120 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_121 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_122 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_123 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_124 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_125 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_126 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_127 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_128 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_129 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_130 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_131 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_132 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_133 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_134 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_135 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_136 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_137 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_138 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_139 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_140 | 0.0 | 1.0 | 0.0 |
| GOCHANPE_141 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_142 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_143 | 1.0 | 0.0 | 1.0 |
| GOCHANPE_144 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)