Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 1 | 5.10 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCANCFMK_14 | 52406 | 53611 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| KCANCFMK_77 | 2954 | 3817 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| KCANCFMK_77 | 1612 | 2778 | tet(X) | ARO:3000205 | tet(X) | 99.23 | 100.00 | M37699.1 |
| KCANCFMK_77 | 304 | 1443 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KCANCFMK_77 | 1612 | 2778 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCANCFMK_77 | 2954 | 3814 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| KCANCFMK_77 | 304 | 1440 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| KCANCFMK_77 | 1612 | 2775 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| KCANCFMK_14 | 53636 | 54145 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| KCANCFMK_14 | 52406 | 53608 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCANCFMK_66 | 11354 | 12934 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCANCFMK_1 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_2 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_3 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_4 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_5 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_6 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_7 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_8 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_9 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_10 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_11 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_12 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_13 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_14 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_15 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_16 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_17 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_18 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_19 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_20 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_21 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_22 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_23 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_24 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_25 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_26 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_27 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_28 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_29 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_30 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_31 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_32 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_33 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_34 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_35 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_36 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_37 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_38 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_39 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_40 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_41 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_42 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_43 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_44 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_45 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_46 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_47 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_48 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_49 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_50 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_51 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_52 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_53 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_54 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_55 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_56 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_57 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_58 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_59 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_60 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_61 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_62 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_63 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_64 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_65 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_66 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_67 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_68 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_69 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_70 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_71 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_72 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_73 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_74 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_75 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_76 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_77 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_78 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_79 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_80 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_81 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_82 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_83 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_84 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_85 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_86 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_87 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_88 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_89 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_90 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_91 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_92 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_93 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_94 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_95 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_96 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_97 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_98 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_99 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_101 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_102 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_103 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_104 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_105 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_106 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_107 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_108 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_109 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_110 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_111 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_112 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_113 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_114 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_115 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_116 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_117 | 0.0 | 1.0 | 0.0 |
| KCANCFMK_118 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_119 | 1.0 | 0.0 | 1.0 |
| KCANCFMK_120 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCANCFMK_29 | 24102 | 33853 | True | Unknown | VOG8336, |
Phigaro v2.4.0 (Database: Jan. 2024 release)