Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LCOHNDGE_1 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_2 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_3 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_4 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_5 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_6 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_7 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_8 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_9 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_10 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_11 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_12 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_13 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_14 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_15 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_16 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_17 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_18 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_19 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_20 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_21 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_22 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_23 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_24 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_25 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_26 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_27 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_28 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_29 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_30 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_31 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_32 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_33 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_34 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_35 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_36 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_37 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_38 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_39 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_40 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_41 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_42 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_43 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_44 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_45 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_46 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_47 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_48 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_49 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_50 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_51 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_52 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_53 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_54 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_55 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_56 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_57 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_58 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_59 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_60 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_61 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_62 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_63 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_64 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_65 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_66 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_67 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_68 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_69 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_70 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_71 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_72 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_73 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_74 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_75 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_76 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_77 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_78 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_79 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_80 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_81 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_82 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_83 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_84 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_85 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_86 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_87 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_88 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_89 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_90 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_91 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_92 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_93 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_94 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_95 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_96 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_97 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_98 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_99 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_100 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_101 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_102 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_103 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_104 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_105 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_106 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_107 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_108 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_109 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_110 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_111 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_112 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_113 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_114 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_115 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_116 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_117 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_118 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_119 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_120 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_121 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_122 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_123 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_124 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_125 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_126 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_127 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_128 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_129 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_130 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_131 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_132 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_133 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_134 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_135 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_136 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_137 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_138 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_139 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_140 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_141 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_142 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_143 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_144 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_146 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_147 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_148 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_149 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_150 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_151 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_152 | 0.0 | 1.0 | 0.0 |
| LCOHNDGE_153 | 1.0 | 0.0 | 1.0 |
| LCOHNDGE_154 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LCOHNDGE_8 | 113460 | 122255 | True | Unknown | VOG7318, |
| LCOHNDGE_22 | 68441 | 76857 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)