Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NPPDCFIO_86 | 12146 | 13036 | CblA-1 | ARO:3002999 | CblA-1 | 97.64 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NPPDCFIO_86 | 12146 | 13033 | cblA | CblA family class A beta-lactamase | BLASTX | 97.64 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NPPDCFIO_1 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_2 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_3 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_4 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_5 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_6 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_7 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_8 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_9 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_10 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_11 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_12 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_13 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_14 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_15 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_16 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_17 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_18 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_19 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_20 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_21 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_22 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_23 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_24 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_25 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_26 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_27 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_28 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_29 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_30 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_31 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_32 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_33 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_34 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_35 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_36 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_37 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_38 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_39 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_40 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_41 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_42 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_43 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_44 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_45 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_46 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_47 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_48 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_49 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_50 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_51 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_52 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_53 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_54 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_55 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_56 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_57 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_58 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_59 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_60 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_61 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_62 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_63 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_64 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_65 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_66 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_67 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_68 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_69 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_70 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_71 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_72 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_73 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_74 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_75 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_76 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_77 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_78 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_79 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_80 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_81 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_82 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_83 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_84 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_85 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_86 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_87 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_88 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_89 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_90 | 1.0 | 0.0 | 1.0 |
| NPPDCFIO_91 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_92 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_93 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_94 | 0.0 | 1.0 | 0.0 |
| NPPDCFIO_95 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)