Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GJDPFKAE_23 | 40068 | 41273 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GJDPFKAE_23 | 39534 | 40043 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| GJDPFKAE_23 | 40071 | 41273 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GJDPFKAE_64 | 11354 | 12934 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GJDPFKAE_1 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_2 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_3 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_4 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_5 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_6 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_7 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_8 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_9 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_10 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_11 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_12 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_13 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_14 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_15 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_16 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_17 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_18 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_19 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_20 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_21 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_22 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_23 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_24 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_25 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_26 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_27 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_28 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_29 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_30 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_31 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_32 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_33 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_34 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_35 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_36 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_37 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_38 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_39 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_40 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_41 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_42 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_43 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_44 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_45 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_46 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_47 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_48 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_49 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_50 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_51 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_52 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_53 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_54 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_55 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_56 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_57 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_58 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_59 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_60 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_61 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_62 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_63 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_64 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_65 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_66 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_67 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_68 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_69 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_70 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_71 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_72 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_73 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_74 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_75 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_76 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_77 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_78 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_79 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_80 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_81 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_82 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_83 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_84 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_85 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_86 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_87 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_88 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_89 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_90 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_91 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_92 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_93 | 0.0 | 1.0 | 0.0 |
| GJDPFKAE_94 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_95 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_96 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_97 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_98 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_99 | 1.0 | 0.0 | 1.0 |
| GJDPFKAE_100 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)