Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJEMOOAD_8 | 52727 | 53932 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| LJEMOOAD_71 | 15664 | 16464 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| LJEMOOAD_71 | 14219 | 15358 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| LJEMOOAD_71 | 12884 | 14020 | tet(X) | ARO:3000205 | tet(X) | 99.21 | 97.42 | M37699.1 |
| LJEMOOAD_71 | 11845 | 12708 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LJEMOOAD_71 | 15664 | 16464 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| LJEMOOAD_71 | 12884 | 14050 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJEMOOAD_71 | 11848 | 12708 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| LJEMOOAD_71 | 14222 | 15358 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| LJEMOOAD_71 | 12887 | 14050 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| LJEMOOAD_71 | 15664 | 16461 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| LJEMOOAD_8 | 53957 | 54466 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| LJEMOOAD_8 | 52727 | 53929 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LJEMOOAD_114 | 6795 | 5215 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LJEMOOAD_1 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_2 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_3 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_4 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_5 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_6 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_7 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_8 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_9 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_10 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_11 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_12 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_13 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_14 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_15 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_16 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_17 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_18 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_19 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_20 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_21 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_22 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_23 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_24 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_25 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_26 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_27 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_28 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_29 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_30 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_31 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_32 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_33 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_34 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_35 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_36 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_37 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_38 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_39 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_40 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_41 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_42 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_43 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_44 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_45 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_46 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_47 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_48 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_49 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_50 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_51 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_52 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_53 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_54 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_55 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_56 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_57 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_58 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_59 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_60 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_61 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_62 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_63 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_64 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_65 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_66 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_67 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_68 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_69 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_70 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_71 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_72 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_73 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_74 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_75 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_76 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_77 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_78 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_79 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_80 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_81 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_82 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_83 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_84 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_85 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_86 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_87 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_88 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_89 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_90 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_91 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_92 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_93 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_94 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_95 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_96 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_97 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_98 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_99 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_100 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_101 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_102 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_103 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_104 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_105 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_106 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_107 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_108 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_109 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_110 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_111 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_112 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_113 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_114 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_115 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_116 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_117 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_118 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_119 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_120 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_121 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_122 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_123 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_124 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_125 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_126 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_127 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_128 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_129 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_130 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_131 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_132 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_133 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_134 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_135 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_136 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_137 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_138 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_139 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_140 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_141 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_142 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_143 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_144 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_145 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_146 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_147 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_148 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_149 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_150 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_151 | 0.0 | 1.0 | 0.0 |
| LJEMOOAD_152 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_153 | 1.0 | 0.0 | 1.0 |
| LJEMOOAD_154 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)