Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NHGCOCNI_185 | 70224 | 71804 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NHGCOCNI_1 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_2 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_3 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_4 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_5 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_6 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_7 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_8 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_9 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_10 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_11 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_12 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_13 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_14 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_15 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_16 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_17 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_18 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_19 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_20 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_21 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_22 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_23 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_24 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_25 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_26 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_27 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_28 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_29 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_30 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_31 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_32 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_33 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_34 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_35 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_36 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_37 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_38 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_39 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_40 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_41 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_42 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_43 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_44 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_45 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_46 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_47 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_48 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_49 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_50 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_51 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_52 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_53 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_54 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_55 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_56 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_57 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_58 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_59 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_60 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_61 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_62 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_63 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_64 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_65 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_66 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_67 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_68 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_69 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_70 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_71 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_72 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_73 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_74 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_75 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_76 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_77 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_78 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_79 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_80 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_81 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_82 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_83 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_84 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_85 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_86 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_87 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_88 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_89 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_90 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_91 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_92 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_93 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_94 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_95 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_96 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_97 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_98 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_99 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_100 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_101 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_102 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_103 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_104 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_105 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_106 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_107 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_108 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_109 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_110 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_111 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_112 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_113 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_114 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_115 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_116 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_117 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_118 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_119 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_120 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_121 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_122 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_123 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_124 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_125 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_126 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_127 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_128 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_129 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_130 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_131 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_132 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_133 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_134 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_135 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_136 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_137 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_138 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_139 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_140 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_141 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_142 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_143 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_144 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_145 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_146 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_147 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_148 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_149 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_150 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_151 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_152 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_153 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_154 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_155 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_156 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_157 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_158 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_159 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_160 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_161 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_162 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_163 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_164 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_165 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_166 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_167 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_168 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_169 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_170 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_171 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_172 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_173 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_174 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_175 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_176 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_177 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_178 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_179 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_180 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_181 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_182 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_183 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_184 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_185 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_186 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_187 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_188 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_189 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_190 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_191 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_192 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_193 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_194 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_195 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_196 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_197 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_198 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_199 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_200 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_201 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_202 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_203 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_204 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_205 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_206 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_207 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_208 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_209 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_210 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_211 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_212 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_213 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_214 | 1.0 | 0.0 | 1.0 |
| NHGCOCNI_215 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_216 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_217 | 0.0 | 1.0 | 0.0 |
| NHGCOCNI_218 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NHGCOCNI_77 | 26766 | 40203 | False | Siphoviridae | VOG5096, |
| NHGCOCNI_211 | 42443 | 55275 | False | Unknown | VOG7892, |
Phigaro v2.4.0 (Database: Jan. 2024 release)