Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EGPGNOMC_5 | 52408 | 53613 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EGPGNOMC_5 | 53638 | 54147 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| EGPGNOMC_5 | 52408 | 53610 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EGPGNOMC_87 | 6530 | 4950 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EGPGNOMC_1 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_2 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_3 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_4 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_5 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_6 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_7 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_8 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_9 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_10 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_11 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_12 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_13 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_14 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_15 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_16 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_17 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_18 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_19 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_20 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_21 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_22 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_23 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_24 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_25 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_26 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_27 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_28 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_29 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_30 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_31 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_32 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_33 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_34 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_35 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_36 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_37 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_38 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_39 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_40 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_41 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_42 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_43 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_44 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_45 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_46 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_47 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_48 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_49 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_50 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_51 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_52 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_53 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_54 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_55 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_56 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_57 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_58 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_59 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_60 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_61 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_62 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_63 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_64 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_65 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_66 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_67 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_68 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_69 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_70 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_71 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_72 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_73 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_74 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_75 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_76 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_77 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_78 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_79 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_80 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_81 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_82 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_83 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_84 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_85 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_86 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_87 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_88 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_89 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_90 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_91 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_92 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_93 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_94 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_95 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_96 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_97 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_98 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_99 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_100 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_101 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_102 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_103 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_104 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_105 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_106 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_107 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_108 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_109 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_110 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_111 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_112 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_113 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_114 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_115 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_116 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_117 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_118 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_119 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_120 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_121 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_122 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_123 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_124 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_125 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_126 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_127 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_128 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_129 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_130 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_131 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_132 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_133 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_134 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_135 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_136 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_137 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_138 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_139 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_140 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_141 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_142 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_143 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_144 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_145 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_146 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_147 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_148 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_149 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_150 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_151 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_152 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_153 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_154 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_155 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_156 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_157 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_158 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_159 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_160 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_161 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_162 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_163 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_164 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_165 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_166 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_167 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_168 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_169 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_170 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_171 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_172 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_173 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_174 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_175 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_176 | 0.0 | 1.0 | 0.0 |
| EGPGNOMC_177 | 1.0 | 0.0 | 1.0 |
| EGPGNOMC_178 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EGPGNOMC_22 | 24106 | 33857 | True | Unknown | VOG8336, |
Phigaro v2.4.0 (Database: Jan. 2024 release)