Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CAMKFHPL_29 | 10822 | 11787 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CAMKFHPL_29 | 10822 | 11787 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| CAMKFHPL_29 | 10822 | 11787 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| CAMKFHPL_29 | 10822 | 11787 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| CAMKFHPL_29 | 10822 | 11787 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CAMKFHPL_29 | 10825 | 11787 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CAMKFHPL_17 | 71693 | 70113 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CAMKFHPL_1 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_2 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_3 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_4 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_5 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_6 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_7 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_8 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_9 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_10 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_11 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_12 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_13 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_14 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_15 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_16 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_17 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_18 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_19 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_20 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_21 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_22 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_23 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_24 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_25 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_26 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_27 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_28 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_29 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_30 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_31 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_32 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_33 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_34 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_35 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_36 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_37 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_38 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_39 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_40 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_41 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_42 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_43 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_44 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_45 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_46 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_47 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_48 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_49 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_50 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_51 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_52 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_53 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_54 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_55 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_56 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_57 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_58 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_59 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_60 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_61 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_62 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_63 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_64 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_65 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_66 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_67 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_68 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_69 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_70 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_71 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_72 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_73 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_74 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_75 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_76 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_77 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_78 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_79 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_80 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_81 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_82 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_83 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_84 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_85 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_86 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_87 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_88 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_89 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_90 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_91 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_92 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_93 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_94 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_95 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_96 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_97 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_98 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_99 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_100 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_101 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_102 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_103 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_104 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_105 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_106 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_107 | 1.0 | 0.0 | 1.0 |
| CAMKFHPL_108 | 0.0 | 1.0 | 0.0 |
| CAMKFHPL_109 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CAMKFHPL_14 | 121087 | 128470 | False | Siphoviridae | VOG4564, |
Phigaro v2.4.0 (Database: Jan. 2024 release)