Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HHNNJJGG_34 | 11777 | 13357 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HHNNJJGG_1 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_2 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_3 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_4 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_5 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_6 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_7 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_8 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_9 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_10 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_11 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_12 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_13 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_14 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_15 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_16 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_17 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_18 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_19 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_20 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_21 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_22 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_23 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_24 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_25 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_26 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_27 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_28 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_29 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_30 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_31 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_32 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_33 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_34 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_35 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_36 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_37 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_38 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_39 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_40 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_41 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_42 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_43 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_44 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_45 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_46 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_47 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_48 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_49 | 1.0 | 0.0 | 1.0 |
| HHNNJJGG_50 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_51 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_52 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_53 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_54 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_55 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_56 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_57 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_58 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_59 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_60 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_61 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_62 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_63 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_64 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_65 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_66 | 1.0 | 0.0 | 1.0 |
| HHNNJJGG_67 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_68 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_69 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_70 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_71 | 1.0 | 0.0 | 1.0 |
| HHNNJJGG_72 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_73 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_74 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_75 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_76 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_77 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_78 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_79 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_80 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_81 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_82 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_83 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_84 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_85 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_86 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_87 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_88 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_89 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_90 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_91 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_92 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_93 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_94 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_95 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_96 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_97 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_98 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_99 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_100 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_101 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_102 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_103 | 1.0 | 0.0 | 1.0 |
| HHNNJJGG_104 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_105 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_106 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_107 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_108 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_109 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_110 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_111 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_112 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_113 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_114 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_115 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_116 | 0.0 | 1.0 | 0.0 |
| HHNNJJGG_117 | 1.0 | 0.0 | 1.0 |
| HHNNJJGG_118 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HHNNJJGG_6 | 96888 | 110325 | False | Siphoviridae | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)