Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NGHCHIBP_4 | 197335 | 198225 | CblA-1 | ARO:3002999 | CblA-1 | 97.64 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NGHCHIBP_4 | 197335 | 198222 | cblA | CblA family class A beta-lactamase | BLASTX | 97.64 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NGHCHIBP_1 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_2 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_3 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_4 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_5 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_6 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_7 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_8 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_9 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_10 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_11 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_12 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_13 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_14 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_15 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_16 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_17 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_18 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_19 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_20 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_21 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_22 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_23 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_24 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_25 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_26 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_27 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_28 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_29 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_30 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_31 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_32 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_33 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_34 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_35 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_36 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_37 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_38 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_39 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_40 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_41 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_42 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_43 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_44 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_45 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_46 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_47 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_48 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_49 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_50 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_51 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_52 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_53 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_54 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_55 | 1.0 | 0.0 | 1.0 |
| NGHCHIBP_56 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_57 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_58 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_59 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_60 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_61 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_62 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_63 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_64 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_65 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_66 | 1.0 | 0.0 | 1.0 |
| NGHCHIBP_67 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_68 | 1.0 | 0.0 | 1.0 |
| NGHCHIBP_69 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_70 | 0.0 | 1.0 | 0.0 |
| NGHCHIBP_71 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NGHCHIBP_14 | 10551 | 18736 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)