Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LIIKEDDA_1 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_2 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_3 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_4 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_5 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_6 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_7 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_8 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_9 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_10 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_11 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_12 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_13 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_14 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_15 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_16 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_17 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_18 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_19 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_20 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_21 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_22 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_23 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_24 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_25 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_26 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_27 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_28 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_29 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_30 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_31 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_32 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_33 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_34 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_35 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_36 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_37 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_38 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_39 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_40 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_41 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_42 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_43 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_44 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_45 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_46 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_47 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_48 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_49 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_50 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_51 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_52 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_53 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_54 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_55 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_56 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_57 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_58 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_59 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_60 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_61 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_62 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_63 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_64 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_65 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_66 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_67 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_68 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_69 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_70 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_71 | 1.0 | 0.0 | 1.0 |
| LIIKEDDA_72 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_73 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_74 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_75 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_76 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_77 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_78 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_79 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_80 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_81 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_82 | 0.0 | 1.0 | 0.0 |
| LIIKEDDA_83 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LIIKEDDA_6 | 36196 | 38695 | False | Siphoviridae | VOG1298, |
Phigaro v2.4.0 (Database: Jan. 2024 release)