Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APICEHLB_15 | 65524 | 66489 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| APICEHLB_15 | 65524 | 66489 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| APICEHLB_15 | 65524 | 66489 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| APICEHLB_15 | 65524 | 66489 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| APICEHLB_15 | 65524 | 66489 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APICEHLB_15 | 65524 | 66486 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| APICEHLB_12 | 47051 | 48631 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| APICEHLB_1 | 0.0 | 1.0 | 0.0 |
| APICEHLB_2 | 0.0 | 1.0 | 0.0 |
| APICEHLB_3 | 0.0 | 1.0 | 0.0 |
| APICEHLB_4 | 0.0 | 1.0 | 0.0 |
| APICEHLB_5 | 0.0 | 1.0 | 0.0 |
| APICEHLB_6 | 0.0 | 1.0 | 0.0 |
| APICEHLB_7 | 0.0 | 1.0 | 0.0 |
| APICEHLB_8 | 0.0 | 1.0 | 0.0 |
| APICEHLB_9 | 0.0 | 1.0 | 0.0 |
| APICEHLB_10 | 0.0 | 1.0 | 0.0 |
| APICEHLB_11 | 0.0 | 1.0 | 0.0 |
| APICEHLB_12 | 0.0 | 1.0 | 0.0 |
| APICEHLB_13 | 0.0 | 1.0 | 0.0 |
| APICEHLB_14 | 0.0 | 1.0 | 0.0 |
| APICEHLB_15 | 0.0 | 1.0 | 0.0 |
| APICEHLB_16 | 0.0 | 1.0 | 0.0 |
| APICEHLB_17 | 0.0 | 1.0 | 0.0 |
| APICEHLB_18 | 0.0 | 1.0 | 0.0 |
| APICEHLB_19 | 0.0 | 1.0 | 0.0 |
| APICEHLB_20 | 1.0 | 0.0 | 1.0 |
| APICEHLB_21 | 0.0 | 1.0 | 0.0 |
| APICEHLB_22 | 0.0 | 1.0 | 0.0 |
| APICEHLB_23 | 0.0 | 1.0 | 0.0 |
| APICEHLB_24 | 0.0 | 1.0 | 0.0 |
| APICEHLB_25 | 0.0 | 1.0 | 0.0 |
| APICEHLB_26 | 0.0 | 1.0 | 0.0 |
| APICEHLB_27 | 0.0 | 1.0 | 0.0 |
| APICEHLB_28 | 0.0 | 1.0 | 0.0 |
| APICEHLB_29 | 0.0 | 1.0 | 0.0 |
| APICEHLB_30 | 0.0 | 1.0 | 0.0 |
| APICEHLB_31 | 0.0 | 1.0 | 0.0 |
| APICEHLB_32 | 0.0 | 1.0 | 0.0 |
| APICEHLB_33 | 0.0 | 1.0 | 0.0 |
| APICEHLB_34 | 0.0 | 1.0 | 0.0 |
| APICEHLB_35 | 0.0 | 1.0 | 0.0 |
| APICEHLB_36 | 0.0 | 1.0 | 0.0 |
| APICEHLB_37 | 0.0 | 1.0 | 0.0 |
| APICEHLB_38 | 0.0 | 1.0 | 0.0 |
| APICEHLB_39 | 0.0 | 1.0 | 0.0 |
| APICEHLB_40 | 0.0 | 1.0 | 0.0 |
| APICEHLB_41 | 0.0 | 1.0 | 0.0 |
| APICEHLB_42 | 0.0 | 1.0 | 0.0 |
| APICEHLB_43 | 0.0 | 1.0 | 0.0 |
| APICEHLB_44 | 0.0 | 1.0 | 0.0 |
| APICEHLB_45 | 0.0 | 1.0 | 0.0 |
| APICEHLB_46 | 0.0 | 1.0 | 0.0 |
| APICEHLB_47 | 0.0 | 1.0 | 0.0 |
| APICEHLB_48 | 0.0 | 1.0 | 0.0 |
| APICEHLB_49 | 0.0 | 1.0 | 0.0 |
| APICEHLB_50 | 0.0 | 1.0 | 0.0 |
| APICEHLB_51 | 0.0 | 1.0 | 0.0 |
| APICEHLB_52 | 1.0 | 0.0 | 1.0 |
| APICEHLB_53 | 0.0 | 1.0 | 0.0 |
| APICEHLB_54 | 0.0 | 1.0 | 0.0 |
| APICEHLB_55 | 0.0 | 1.0 | 0.0 |
| APICEHLB_56 | 0.0 | 1.0 | 0.0 |
| APICEHLB_57 | 0.0 | 1.0 | 0.0 |
| APICEHLB_58 | 0.0 | 1.0 | 0.0 |
| APICEHLB_59 | 0.0 | 1.0 | 0.0 |
| APICEHLB_60 | 0.0 | 1.0 | 0.0 |
| APICEHLB_61 | 0.0 | 1.0 | 0.0 |
| APICEHLB_62 | 0.0 | 1.0 | 0.0 |
| APICEHLB_63 | 0.0 | 1.0 | 0.0 |
| APICEHLB_64 | 0.0 | 1.0 | 0.0 |
| APICEHLB_65 | 0.0 | 1.0 | 0.0 |
| APICEHLB_66 | 0.0 | 1.0 | 0.0 |
| APICEHLB_67 | 0.0 | 1.0 | 0.0 |
| APICEHLB_68 | 0.0 | 1.0 | 0.0 |
| APICEHLB_69 | 1.0 | 0.0 | 1.0 |
| APICEHLB_70 | 0.0 | 1.0 | 0.0 |
| APICEHLB_71 | 0.0 | 1.0 | 0.0 |
| APICEHLB_72 | 0.0 | 1.0 | 0.0 |
| APICEHLB_73 | 0.0 | 1.0 | 0.0 |
| APICEHLB_74 | 0.0 | 1.0 | 0.0 |
| APICEHLB_75 | 0.0 | 1.0 | 0.0 |
| APICEHLB_76 | 0.0 | 1.0 | 0.0 |
| APICEHLB_77 | 0.0 | 1.0 | 0.0 |
| APICEHLB_78 | 0.0 | 1.0 | 0.0 |
| APICEHLB_79 | 0.0 | 1.0 | 0.0 |
| APICEHLB_80 | 0.0 | 1.0 | 0.0 |
| APICEHLB_81 | 0.0 | 1.0 | 0.0 |
| APICEHLB_82 | 0.0 | 1.0 | 0.0 |
| APICEHLB_83 | 0.0 | 1.0 | 0.0 |
| APICEHLB_84 | 0.0 | 1.0 | 0.0 |
| APICEHLB_85 | 0.0 | 1.0 | 0.0 |
| APICEHLB_86 | 0.0 | 1.0 | 0.0 |
| APICEHLB_87 | 1.0 | 0.0 | 1.0 |
| APICEHLB_88 | 0.0 | 1.0 | 0.0 |
| APICEHLB_89 | 0.0 | 1.0 | 0.0 |
| APICEHLB_90 | 1.0 | 0.0 | 1.0 |
| APICEHLB_91 | 0.0 | 1.0 | 0.0 |
| APICEHLB_92 | 0.0 | 1.0 | 0.0 |
| APICEHLB_93 | 1.0 | 0.0 | 1.0 |
| APICEHLB_94 | 1.0 | 0.0 | 1.0 |
| APICEHLB_95 | 0.0 | 1.0 | 0.0 |
| APICEHLB_96 | 0.0 | 1.0 | 0.0 |
| APICEHLB_97 | 0.0 | 1.0 | 0.0 |
| APICEHLB_98 | 0.0 | 1.0 | 0.0 |
| APICEHLB_99 | 0.0 | 1.0 | 0.0 |
| APICEHLB_100 | 0.0 | 1.0 | 0.0 |
| APICEHLB_101 | 0.0 | 1.0 | 0.0 |
| APICEHLB_102 | 1.0 | 0.0 | 1.0 |
| APICEHLB_103 | 0.0 | 1.0 | 0.0 |
| APICEHLB_104 | 0.0 | 1.0 | 0.0 |
| APICEHLB_105 | 0.0 | 1.0 | 0.0 |
| APICEHLB_106 | 0.0 | 1.0 | 0.0 |
| APICEHLB_107 | 1.0 | 0.0 | 1.0 |
| APICEHLB_108 | 0.0 | 1.0 | 0.0 |
| APICEHLB_109 | 1.0 | 0.0 | 1.0 |
| APICEHLB_110 | 0.0 | 1.0 | 0.0 |
| APICEHLB_111 | 0.0 | 1.0 | 0.0 |
| APICEHLB_112 | 0.0 | 1.0 | 0.0 |
| APICEHLB_113 | 1.0 | 0.0 | 1.0 |
| APICEHLB_114 | 0.0 | 1.0 | 0.0 |
| APICEHLB_115 | 0.0 | 1.0 | 0.0 |
| APICEHLB_116 | 1.0 | 0.0 | 1.0 |
| APICEHLB_117 | 1.0 | 0.0 | 1.0 |
| APICEHLB_118 | 0.0 | 1.0 | 0.0 |
| APICEHLB_119 | 0.0 | 1.0 | 0.0 |
| APICEHLB_120 | 1.0 | 0.0 | 1.0 |
| APICEHLB_121 | 0.0 | 1.0 | 0.0 |
| APICEHLB_122 | 0.0 | 1.0 | 0.0 |
| APICEHLB_123 | 0.0 | 1.0 | 0.0 |
| APICEHLB_124 | 0.0 | 1.0 | 0.0 |
| APICEHLB_125 | 0.0 | 1.0 | 0.0 |
| APICEHLB_126 | 0.0 | 1.0 | 0.0 |
| APICEHLB_127 | 0.0 | 1.0 | 0.0 |
| APICEHLB_128 | 0.0 | 1.0 | 0.0 |
| APICEHLB_129 | 1.0 | 0.0 | 1.0 |
| APICEHLB_130 | 1.0 | 0.0 | 1.0 |
| APICEHLB_131 | 1.0 | 0.0 | 1.0 |
| APICEHLB_132 | 0.0 | 1.0 | 0.0 |
| APICEHLB_133 | 0.0 | 1.0 | 0.0 |
| APICEHLB_134 | 0.0 | 1.0 | 0.0 |
| APICEHLB_135 | 0.0 | 1.0 | 0.0 |
| APICEHLB_136 | 0.0 | 1.0 | 0.0 |
| APICEHLB_137 | 1.0 | 0.0 | 1.0 |
| APICEHLB_138 | 1.0 | 0.0 | 1.0 |
| APICEHLB_139 | 1.0 | 0.0 | 1.0 |
| APICEHLB_140 | 1.0 | 0.0 | 1.0 |
| APICEHLB_141 | 1.0 | 0.0 | 1.0 |
| APICEHLB_142 | 0.0 | 1.0 | 0.0 |
| APICEHLB_143 | 1.0 | 0.0 | 1.0 |
| APICEHLB_144 | 1.0 | 0.0 | 1.0 |
| APICEHLB_145 | 1.0 | 0.0 | 1.0 |
| APICEHLB_146 | 0.0 | 1.0 | 0.0 |
| APICEHLB_147 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| APICEHLB_38 | 33925 | 48668 | False | Siphoviridae | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)