Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GLGHDIKB_40 | 9275 | 7695 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GLGHDIKB_1 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_2 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_3 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_4 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_5 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_6 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_7 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_8 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_9 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_10 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_11 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_12 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_13 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_14 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_15 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_16 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_17 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_18 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_19 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_20 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_21 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_22 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_23 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_24 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_25 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_26 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_27 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_28 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_29 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_30 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_31 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_32 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_33 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_34 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_35 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_36 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_37 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_38 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_39 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_40 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_41 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_42 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_43 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_44 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_45 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_46 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_47 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_48 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_49 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_50 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_51 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_52 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_53 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_54 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_55 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_56 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_57 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_58 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_59 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_60 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_61 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_62 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_63 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_64 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_65 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_66 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_67 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_68 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_69 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_70 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_71 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_72 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_73 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_74 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_75 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_76 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_77 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_78 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_79 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_80 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_81 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_82 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_83 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_84 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_85 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_86 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_87 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_88 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_89 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_90 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_91 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_92 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_93 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_94 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_95 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_96 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_97 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_98 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_99 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_100 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_101 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_102 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_103 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_104 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_105 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_106 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_107 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_108 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_109 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_110 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_111 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_112 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_113 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_114 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_115 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_116 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_117 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_118 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_119 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_120 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_121 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_122 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_123 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_124 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_125 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_126 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_127 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_128 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_129 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_130 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_131 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_132 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_133 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_134 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_135 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_136 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_137 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_138 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_139 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_140 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_141 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_142 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_143 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_144 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_145 | 1.0 | 0.0 | 1.0 |
| GLGHDIKB_146 | 0.0 | 1.0 | 0.0 |
| GLGHDIKB_147 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GLGHDIKB_17 | 30537 | 42525 | False | Siphoviridae | VOG4564, |
Phigaro v2.4.0 (Database: Jan. 2024 release)