Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DJFCEJOA_5 | 23795 | 22215 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DJFCEJOA_1 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_2 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_3 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_4 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_5 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_6 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_7 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_8 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_9 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_10 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_11 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_12 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_13 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_14 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_15 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_16 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_17 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_18 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_19 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_20 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_21 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_22 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_23 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_24 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_25 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_26 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_27 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_28 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_29 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_30 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_31 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_32 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_33 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_34 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_35 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_36 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_37 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_38 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_39 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_40 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_41 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_42 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_43 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_44 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_45 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_46 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_47 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_48 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_49 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_50 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_51 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_52 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_53 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_54 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_55 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_56 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_57 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_58 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_59 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_60 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_61 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_62 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_63 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_64 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_65 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_66 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_67 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_68 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_69 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_70 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_71 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_72 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_73 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_74 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_75 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_76 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_77 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_78 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_79 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_80 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_81 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_82 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_83 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_84 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_85 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_86 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_87 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_88 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_89 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_90 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_91 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_92 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_93 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_94 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_95 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_96 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_97 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_98 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_99 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_100 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_101 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_102 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_103 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_104 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_105 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_106 | 1.0 | 0.0 | 1.0 |
| DJFCEJOA_107 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_108 | 0.0 | 1.0 | 0.0 |
| DJFCEJOA_109 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DJFCEJOA_16 | 2884 | 8171 | False | Unknown | VOG1356, |
| DJFCEJOA_22 | 76816 | 82341 | False | Unknown | VOG6366, |
| DJFCEJOA_63 | 15694 | 22605 | False | Unknown | VOG0572, |
| DJFCEJOA_66 | 5032 | 23867 | False | Siphoviridae | VOG2675, |
Phigaro v2.4.0 (Database: Jan. 2024 release)