Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OMLIALLN_8 | 160534 | 162114 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OMLIALLN_1 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_2 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_3 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_4 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_5 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_6 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_7 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_8 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_9 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_10 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_11 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_12 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_13 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_14 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_15 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_16 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_17 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_18 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_19 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_20 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_21 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_22 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_23 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_24 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_25 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_26 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_27 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_28 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_29 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_30 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_31 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_32 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_33 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_34 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_35 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_36 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_37 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_38 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_39 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_40 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_41 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_42 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_43 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_44 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_45 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_46 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_47 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_48 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_49 | 1.0 | 0.0 | 1.0 |
| OMLIALLN_50 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_51 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_52 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_53 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_54 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_55 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_56 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_57 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_58 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_59 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_60 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_61 | 1.0 | 0.0 | 1.0 |
| OMLIALLN_62 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_63 | 1.0 | 0.0 | 1.0 |
| OMLIALLN_64 | 1.0 | 0.0 | 1.0 |
| OMLIALLN_65 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_66 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_67 | 0.0 | 1.0 | 0.0 |
| OMLIALLN_68 | 1.0 | 0.0 | 1.0 |
| OMLIALLN_69 | 1.0 | 0.0 | 1.0 |
| OMLIALLN_70 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OMLIALLN_2 | 271431 | 279545 | False | Unknown | VOG4711, |
| OMLIALLN_12 | 6358 | 13831 | True | Siphoviridae | VOG0979, |
| OMLIALLN_20 | 34904 | 53739 | False | Siphoviridae | VOG1405, |
| OMLIALLN_25 | 76763 | 82288 | False | Unknown | VOG6366, |
| OMLIALLN_49 | 15694 | 22605 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)