Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GGPGOJDH_5 | 37286 | 38866 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GGPGOJDH_1 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_2 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_3 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_4 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_5 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_6 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_7 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_8 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_9 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_10 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_11 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_12 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_13 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_14 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_15 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_16 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_17 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_18 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_19 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_20 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_21 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_22 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_23 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_24 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_25 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_26 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_27 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_28 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_29 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_30 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_31 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_32 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_33 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_34 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_35 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_36 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_37 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_38 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_39 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_40 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_41 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_42 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_43 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_44 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_45 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_46 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_47 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_48 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_49 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_50 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_51 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_52 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_53 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_54 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_55 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_56 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_57 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_58 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_59 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_60 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_61 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_62 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_63 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_64 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_65 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_66 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_67 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_68 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_69 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_70 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_71 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_72 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_73 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_74 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_75 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_76 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_77 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_78 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_79 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_80 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_81 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_82 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_83 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_84 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_85 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_86 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_87 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_88 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_89 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_90 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_91 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_92 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_93 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_94 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_95 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_96 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_97 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_98 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_99 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_100 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_101 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_102 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_103 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_104 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_105 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_106 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_107 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_108 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_109 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_110 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_111 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_112 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_113 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_114 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_115 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_116 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_117 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_118 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_119 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_120 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_121 | 0.0 | 1.0 | 0.0 |
| GGPGOJDH_122 | 1.0 | 0.0 | 1.0 |
| GGPGOJDH_123 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GGPGOJDH_14 | 82164 | 96907 | False | Siphoviridae | VOG4564, |
Phigaro v2.4.0 (Database: Jan. 2024 release)