Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OAHNLMDM_110 | 9202 | 11127 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OAHNLMDM_110 | 9202 | 11127 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OAHNLMDM_110 | 9205 | 11127 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OAHNLMDM_42 | 3992 | 2412 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OAHNLMDM_1 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_2 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_3 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_4 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_5 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_6 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_7 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_8 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_9 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_10 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_11 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_12 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_13 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_14 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_15 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_16 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_17 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_18 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_19 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_20 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_21 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_22 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_23 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_24 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_25 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_26 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_27 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_28 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_29 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_30 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_31 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_32 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_33 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_34 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_35 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_36 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_37 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_38 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_39 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_40 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_41 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_42 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_43 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_44 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_45 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_46 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_47 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_48 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_49 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_50 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_51 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_52 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_53 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_54 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_55 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_56 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_57 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_58 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_59 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_60 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_61 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_62 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_63 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_64 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_65 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_66 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_67 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_68 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_69 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_70 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_71 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_72 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_73 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_74 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_75 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_76 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_77 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_78 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_79 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_80 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_81 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_82 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_83 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_84 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_85 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_86 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_87 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_88 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_89 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_90 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_91 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_92 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_93 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_94 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_95 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_96 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_97 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_98 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_99 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_100 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_101 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_102 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_103 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_104 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_105 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_106 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_107 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_108 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_109 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_110 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_111 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_112 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_113 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_114 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_115 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_116 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_117 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_118 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_119 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_120 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_121 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_122 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_123 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_124 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_125 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_126 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_127 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_128 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_129 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_130 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_131 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_132 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_133 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_134 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_135 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_136 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_137 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_138 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_139 | 0.0 | 1.0 | 0.0 |
| OAHNLMDM_140 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_141 | 1.0 | 0.0 | 1.0 |
| OAHNLMDM_142 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)