Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FINIGALK_10 | 12908 | 13642 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FINIGALK_10 | 12908 | 13642 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| FINIGALK_10 | 10673 | 12136 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| FINIGALK_10 | 9333 | 10547 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FINIGALK_10 | 12908 | 13639 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| FINIGALK_10 | 10673 | 12133 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| FINIGALK_10 | 9333 | 10556 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FINIGALK_1 | 0.0 | 1.0 | 0.0 |
| FINIGALK_2 | 0.0 | 1.0 | 0.0 |
| FINIGALK_3 | 0.0 | 1.0 | 0.0 |
| FINIGALK_4 | 0.0 | 1.0 | 0.0 |
| FINIGALK_5 | 0.0 | 1.0 | 0.0 |
| FINIGALK_6 | 0.0 | 1.0 | 0.0 |
| FINIGALK_7 | 0.0 | 1.0 | 0.0 |
| FINIGALK_8 | 0.0 | 1.0 | 0.0 |
| FINIGALK_9 | 0.0 | 1.0 | 0.0 |
| FINIGALK_10 | 0.0 | 1.0 | 0.0 |
| FINIGALK_11 | 0.0 | 1.0 | 0.0 |
| FINIGALK_12 | 0.0 | 1.0 | 0.0 |
| FINIGALK_13 | 0.0 | 1.0 | 0.0 |
| FINIGALK_14 | 0.0 | 1.0 | 0.0 |
| FINIGALK_15 | 0.0 | 1.0 | 0.0 |
| FINIGALK_16 | 0.0 | 1.0 | 0.0 |
| FINIGALK_17 | 0.0 | 1.0 | 0.0 |
| FINIGALK_18 | 0.0 | 1.0 | 0.0 |
| FINIGALK_19 | 0.0 | 1.0 | 0.0 |
| FINIGALK_20 | 0.0 | 1.0 | 0.0 |
| FINIGALK_21 | 0.0 | 1.0 | 0.0 |
| FINIGALK_22 | 0.0 | 1.0 | 0.0 |
| FINIGALK_23 | 0.0 | 1.0 | 0.0 |
| FINIGALK_24 | 0.0 | 1.0 | 0.0 |
| FINIGALK_25 | 0.0 | 1.0 | 0.0 |
| FINIGALK_26 | 0.0 | 1.0 | 0.0 |
| FINIGALK_27 | 0.0 | 1.0 | 0.0 |
| FINIGALK_28 | 0.0 | 1.0 | 0.0 |
| FINIGALK_29 | 0.0 | 1.0 | 0.0 |
| FINIGALK_30 | 0.0 | 1.0 | 0.0 |
| FINIGALK_31 | 0.0 | 1.0 | 0.0 |
| FINIGALK_32 | 0.0 | 1.0 | 0.0 |
| FINIGALK_33 | 0.0 | 1.0 | 0.0 |
| FINIGALK_34 | 0.0 | 1.0 | 0.0 |
| FINIGALK_35 | 0.0 | 1.0 | 0.0 |
| FINIGALK_36 | 0.0 | 1.0 | 0.0 |
| FINIGALK_37 | 0.0 | 1.0 | 0.0 |
| FINIGALK_38 | 0.0 | 1.0 | 0.0 |
| FINIGALK_39 | 0.0 | 1.0 | 0.0 |
| FINIGALK_40 | 0.0 | 1.0 | 0.0 |
| FINIGALK_41 | 0.0 | 1.0 | 0.0 |
| FINIGALK_42 | 0.0 | 1.0 | 0.0 |
| FINIGALK_43 | 0.0 | 1.0 | 0.0 |
| FINIGALK_44 | 0.0 | 1.0 | 0.0 |
| FINIGALK_45 | 0.0 | 1.0 | 0.0 |
| FINIGALK_46 | 0.0 | 1.0 | 0.0 |
| FINIGALK_47 | 1.0 | 0.0 | 1.0 |
| FINIGALK_48 | 0.0 | 1.0 | 0.0 |
| FINIGALK_49 | 0.0 | 1.0 | 0.0 |
| FINIGALK_50 | 0.0 | 1.0 | 0.0 |
| FINIGALK_51 | 0.0 | 1.0 | 0.0 |
| FINIGALK_52 | 0.0 | 1.0 | 0.0 |
| FINIGALK_53 | 0.0 | 1.0 | 0.0 |
| FINIGALK_54 | 0.0 | 1.0 | 0.0 |
| FINIGALK_55 | 0.0 | 1.0 | 0.0 |
| FINIGALK_56 | 0.0 | 1.0 | 0.0 |
| FINIGALK_57 | 1.0 | 0.0 | 1.0 |
| FINIGALK_58 | 0.0 | 1.0 | 0.0 |
| FINIGALK_59 | 0.0 | 1.0 | 0.0 |
| FINIGALK_60 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FINIGALK_7 | 28471 | 36887 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)