Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JEAGBMIA_7 | 113245 | 111665 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEAGBMIA_1 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_2 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_3 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_4 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_5 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_6 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_7 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_8 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_9 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_10 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_11 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_12 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_13 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_14 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_15 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_16 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_17 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_18 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_19 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_20 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_21 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_22 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_23 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_24 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_25 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_26 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_27 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_28 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_29 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_30 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_31 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_32 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_33 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_34 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_35 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_36 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_37 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_38 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_39 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_40 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_41 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_42 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_43 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_44 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_45 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_46 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_47 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_48 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_49 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_50 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_51 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_52 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_53 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_54 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_55 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_56 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_57 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_58 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_59 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_60 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_61 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_62 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_63 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_64 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_65 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_66 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_67 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_68 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_69 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_70 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_71 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_72 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_73 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_74 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_75 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_76 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_77 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_78 | 0.0 | 1.0 | 0.0 |
| JEAGBMIA_79 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_80 | 1.0 | 0.0 | 1.0 |
| JEAGBMIA_82 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEAGBMIA_20 | 5409 | 14672 | False | Siphoviridae | VOG0612, |
| JEAGBMIA_23 | 89141 | 94590 | True | Unknown | VOG6282, |
Phigaro v2.4.0 (Database: Jan. 2024 release)