Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBOHIEGI_12 | 28577 | 29782 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBOHIEGI_12 | 29807 | 30316 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| CBOHIEGI_12 | 28577 | 29779 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CBOHIEGI_37 | 1928 | 348 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CBOHIEGI_1 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_2 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_3 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_4 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_5 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_6 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_7 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_8 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_9 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_10 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_11 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_12 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_13 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_14 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_15 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_16 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_17 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_18 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_19 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_20 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_21 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_22 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_23 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_24 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_25 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_26 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_27 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_28 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_29 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_30 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_31 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_32 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_33 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_34 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_35 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_36 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_37 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_38 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_39 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_40 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_41 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_42 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_43 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_44 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_45 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_46 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_47 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_48 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_49 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_50 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_51 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_52 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_53 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_54 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_55 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_56 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_57 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_58 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_59 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_60 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_61 | 1.0 | 0.0 | 1.0 |
| CBOHIEGI_62 | 0.0 | 1.0 | 0.0 |
| CBOHIEGI_63 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)