Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PEDDOBKN_59 | 20751 | 21485 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
| PEDDOBKN_69 | 18750 | 19640 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PEDDOBKN_59 | 20751 | 21485 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PEDDOBKN_59 | 20751 | 21482 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
| PEDDOBKN_69 | 18750 | 19637 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PEDDOBKN_1 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_2 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_3 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_4 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_5 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_6 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_7 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_8 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_9 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_10 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_11 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_12 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_13 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_14 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_15 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_16 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_17 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_18 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_19 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_20 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_21 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_22 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_23 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_24 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_25 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_26 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_27 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_28 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_29 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_30 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_31 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_32 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_33 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_34 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_35 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_36 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_37 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_38 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_39 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_40 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_41 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_42 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_43 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_44 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_45 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_46 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_47 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_48 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_49 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_50 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_51 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_52 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_53 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_54 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_55 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_56 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_57 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_58 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_59 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_60 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_61 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_62 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_63 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_64 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_65 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_66 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_67 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_68 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_69 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_70 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_71 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_72 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_73 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_74 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_75 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_76 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_77 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_78 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_79 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_80 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_81 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_82 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_83 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_84 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_85 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_86 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_87 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_88 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_89 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_90 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_91 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_92 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_93 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_94 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_95 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_96 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_97 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_98 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_99 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_100 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_101 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_102 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_103 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_104 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_105 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_106 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_107 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_108 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_109 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_110 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_111 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_112 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_113 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_114 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_115 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_116 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_117 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_118 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_119 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_120 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_121 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_122 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_123 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_124 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_125 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_126 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_127 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_128 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_129 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_130 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_131 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_132 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_133 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_134 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_135 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_136 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_137 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_138 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_139 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_140 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_141 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_142 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_143 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_144 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_145 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_146 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_147 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_148 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_149 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_150 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_151 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_152 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_153 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_154 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_155 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_156 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_157 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_158 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_159 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_160 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_161 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_162 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_163 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_164 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_165 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_166 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_167 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_168 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_169 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_171 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_172 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_173 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_174 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_175 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_176 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_177 | 1.0 | 0.0 | 1.0 |
| PEDDOBKN_178 | 0.0 | 1.0 | 0.0 |
| PEDDOBKN_179 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PEDDOBKN_34 | 23452 | 29169 | False | Siphoviridae | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)