Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JANDNEAG_21 | 53455 | 54660 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JANDNEAG_21 | 52921 | 53430 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| JANDNEAG_21 | 53458 | 54660 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JANDNEAG_84 | 1928 | 348 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JANDNEAG_1 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_2 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_3 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_4 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_5 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_6 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_7 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_8 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_9 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_10 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_11 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_12 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_13 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_14 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_15 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_16 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_17 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_18 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_19 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_20 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_21 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_22 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_23 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_24 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_25 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_26 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_27 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_28 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_29 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_30 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_31 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_32 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_33 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_34 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_35 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_36 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_37 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_38 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_39 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_40 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_41 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_42 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_43 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_44 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_45 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_46 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_47 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_48 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_49 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_50 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_51 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_52 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_53 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_54 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_55 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_56 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_57 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_58 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_59 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_60 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_61 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_62 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_63 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_64 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_65 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_66 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_67 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_68 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_69 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_70 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_71 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_72 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_73 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_74 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_75 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_76 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_77 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_78 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_79 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_80 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_81 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_82 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_83 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_84 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_85 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_86 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_87 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_88 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_89 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_90 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_91 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_92 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_93 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_94 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_95 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_96 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_97 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_98 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_99 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_100 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_101 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_102 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_103 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_104 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_105 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_106 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_107 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_108 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_109 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_110 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_111 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_112 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_113 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_114 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_115 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_116 | 0.0 | 1.0 | 0.0 |
| JANDNEAG_117 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_118 | 1.0 | 0.0 | 1.0 |
| JANDNEAG_119 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)