Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGJPDJNJ_5 | 53455 | 54660 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGJPDJNJ_5 | 52921 | 53430 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| BGJPDJNJ_5 | 53458 | 54660 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BGJPDJNJ_72 | 6506 | 4926 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BGJPDJNJ_1 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_2 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_3 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_4 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_5 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_6 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_7 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_8 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_9 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_10 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_11 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_12 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_13 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_14 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_15 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_16 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_17 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_18 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_19 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_20 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_21 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_22 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_23 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_24 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_25 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_26 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_27 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_28 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_29 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_30 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_31 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_32 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_33 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_34 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_35 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_36 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_37 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_38 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_39 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_40 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_41 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_42 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_43 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_44 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_45 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_46 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_47 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_48 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_49 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_50 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_51 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_52 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_53 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_54 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_55 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_56 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_57 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_58 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_59 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_60 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_61 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_62 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_63 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_64 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_65 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_66 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_67 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_68 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_69 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_70 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_71 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_72 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_73 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_74 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_75 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_76 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_77 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_78 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_79 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_80 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_81 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_82 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_83 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_84 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_85 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_86 | 1.0 | 0.0 | 1.0 |
| BGJPDJNJ_87 | 0.0 | 1.0 | 0.0 |
| BGJPDJNJ_88 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)