Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBKAMOEM_52 | 26845 | 27645 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| IBKAMOEM_52 | 25400 | 26539 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| IBKAMOEM_52 | 24065 | 25201 | tet(X) | ARO:3000205 | tet(X) | 99.21 | 97.42 | M37699.1 |
| IBKAMOEM_52 | 23026 | 23889 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| IBKAMOEM_21 | 393 | 1598 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IBKAMOEM_52 | 26845 | 27645 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| IBKAMOEM_52 | 24065 | 25231 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBKAMOEM_52 | 23029 | 23889 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| IBKAMOEM_52 | 25403 | 26539 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| IBKAMOEM_52 | 24068 | 25231 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| IBKAMOEM_52 | 26845 | 27642 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| IBKAMOEM_21 | 1623 | 2132 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| IBKAMOEM_21 | 393 | 1595 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IBKAMOEM_128 | 1975 | 3555 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBKAMOEM_1 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_2 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_3 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_4 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_5 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_6 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_7 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_8 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_9 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_10 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_11 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_12 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_13 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_14 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_15 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_16 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_17 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_18 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_19 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_20 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_21 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_22 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_23 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_24 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_25 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_26 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_27 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_28 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_29 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_30 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_31 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_32 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_33 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_34 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_35 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_36 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_37 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_38 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_39 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_40 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_41 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_42 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_43 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_44 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_45 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_46 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_47 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_48 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_49 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_50 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_51 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_52 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_53 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_54 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_55 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_56 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_57 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_58 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_59 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_60 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_61 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_62 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_63 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_64 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_65 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_66 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_67 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_68 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_69 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_70 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_71 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_72 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_73 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_74 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_75 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_76 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_77 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_78 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_79 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_80 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_81 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_82 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_83 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_84 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_85 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_86 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_87 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_88 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_89 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_90 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_91 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_92 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_93 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_94 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_95 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_96 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_97 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_98 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_99 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_100 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_101 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_102 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_103 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_104 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_105 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_106 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_107 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_108 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_109 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_110 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_111 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_112 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_113 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_114 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_115 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_116 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_117 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_118 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_119 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_120 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_121 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_122 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_123 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_124 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_125 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_126 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_127 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_128 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_129 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_130 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_131 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_132 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_133 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_134 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_135 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_136 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_137 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_138 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_139 | 0.0 | 1.0 | 0.0 |
| IBKAMOEM_140 | 1.0 | 0.0 | 1.0 |
| IBKAMOEM_141 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBKAMOEM_18 | 39808 | 50292 | True | Unknown | VOG8253, |
Phigaro v2.4.0 (Database: Jan. 2024 release)