Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ELELMNCO_43 | 31116 | 32006 | CblA-1 | ARO:3002999 | CblA-1 | 97.64 | 100.00 | GQ343019.1 |
| ELELMNCO_15 | 5531 | 7456 | tet(Q) | ARO:3000191 | tet(Q) | 96.88 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ELELMNCO_15 | 5531 | 7456 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.98 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ELELMNCO_15 | 5534 | 7456 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.97 | 100.00 | WP_063856407.1 |
| ELELMNCO_43 | 31116 | 32003 | cblA | CblA family class A beta-lactamase | BLASTX | 97.64 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ELELMNCO_1 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_2 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_3 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_4 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_5 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_6 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_7 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_8 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_9 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_10 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_11 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_12 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_13 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_14 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_15 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_16 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_17 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_18 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_19 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_20 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_21 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_22 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_23 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_24 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_25 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_26 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_27 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_28 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_29 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_30 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_31 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_32 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_33 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_34 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_35 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_36 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_37 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_38 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_39 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_40 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_41 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_42 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_43 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_44 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_45 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_46 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_47 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_48 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_49 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_50 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_51 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_52 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_53 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_54 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_55 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_56 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_57 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_58 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_59 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_60 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_61 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_62 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_63 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_64 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_65 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_66 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_67 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_68 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_69 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_70 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_71 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_72 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_73 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_74 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_75 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_76 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_77 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_78 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_79 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_80 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_81 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_82 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_83 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_84 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_85 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_86 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_87 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_88 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_89 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_90 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_91 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_92 | 0.0 | 1.0 | 0.0 |
| ELELMNCO_93 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_94 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_95 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_96 | 1.0 | 0.0 | 1.0 |
| ELELMNCO_97 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)