Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EGDDIHPI_24 | 2285 | 3865 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EGDDIHPI_1 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_2 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_3 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_4 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_5 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_6 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_7 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_8 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_9 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_10 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_11 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_12 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_13 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_14 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_15 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_16 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_17 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_18 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_19 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_20 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_21 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_22 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_23 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_24 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_25 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_26 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_27 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_28 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_29 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_30 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_31 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_32 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_33 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_34 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_35 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_36 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_37 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_38 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_39 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_40 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_41 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_42 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_43 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_44 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_45 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_46 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_47 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_48 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_49 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_50 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_51 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_52 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_53 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_54 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_55 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_56 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_57 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_58 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_59 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_60 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_61 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_62 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_63 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_64 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_65 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_66 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_67 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_68 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_69 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_70 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_71 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_72 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_73 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_75 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_76 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_77 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_78 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_79 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_80 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_81 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_82 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_83 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_84 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_85 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_86 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_87 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_88 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_89 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_90 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_91 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_92 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_94 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_95 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_96 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_97 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_98 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_99 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_100 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_101 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_102 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_103 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_104 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_105 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_106 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_107 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_108 | 1.0 | 0.0 | 1.0 |
| EGDDIHPI_109 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_110 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_111 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_112 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_113 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_114 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_115 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_116 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_117 | 0.0 | 1.0 | 0.0 |
| EGDDIHPI_118 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)