Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NPGOMCPD_14 | 3054 | 3944 | CblA-1 | ARO:3002999 | CblA-1 | 97.64 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NPGOMCPD_14 | 3057 | 3944 | cblA | CblA family class A beta-lactamase | BLASTX | 97.64 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NPGOMCPD_1 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_2 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_3 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_4 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_5 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_6 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_7 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_8 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_9 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_10 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_11 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_12 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_13 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_14 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_15 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_16 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_17 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_18 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_19 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_20 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_21 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_22 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_23 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_24 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_25 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_26 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_27 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_28 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_29 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_30 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_31 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_32 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_33 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_34 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_35 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_36 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_37 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_38 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_39 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_40 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_41 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_42 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_43 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_44 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_45 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_46 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_47 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_48 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_49 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_50 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_51 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_52 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_53 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_54 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_55 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_56 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_57 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_58 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_59 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_60 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_61 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_62 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_63 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_64 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_65 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_66 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_67 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_68 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_69 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_70 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_71 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_72 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_73 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_74 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_75 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_76 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_77 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_78 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_79 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_80 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_81 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_82 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_83 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_84 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_85 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_86 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_87 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_88 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_89 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_90 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_91 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_92 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_93 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_94 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_95 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_96 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_97 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_98 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_99 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_100 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_101 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_102 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_103 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_104 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_105 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_106 | 0.0 | 1.0 | 0.0 |
| NPGOMCPD_107 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_108 | 1.0 | 0.0 | 1.0 |
| NPGOMCPD_109 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NPGOMCPD_23 | 35064 | 44553 | False | Siphoviridae | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)