Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PNEOPDPM_65 | 2263 | 3843 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PNEOPDPM_1 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_2 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_3 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_4 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_5 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_6 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_7 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_8 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_9 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_10 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_11 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_12 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_13 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_14 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_15 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_16 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_17 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_18 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_19 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_20 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_21 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_22 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_23 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_24 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_25 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_26 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_27 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_28 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_29 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_30 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_31 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_32 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_33 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_34 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_35 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_36 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_37 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_38 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_39 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_40 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_41 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_42 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_43 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_44 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_45 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_46 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_47 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_48 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_49 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_50 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_51 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_52 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_53 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_54 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_55 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_56 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_57 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_58 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_59 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_60 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_61 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_62 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_63 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_64 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_65 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_66 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_67 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_68 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_69 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_70 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_71 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_72 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_73 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_74 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_75 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_76 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_77 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_78 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_79 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_80 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_81 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_82 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_83 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_84 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_85 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_86 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_87 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_88 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_89 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_90 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_91 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_92 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_93 | 0.0 | 1.0 | 0.0 |
| PNEOPDPM_94 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_95 | 1.0 | 0.0 | 1.0 |
| PNEOPDPM_96 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PNEOPDPM_2 | 32162 | 48561 | False | Siphoviridae | VOG5235, |
Phigaro v2.4.0 (Database: Jan. 2024 release)