Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ECLMCPKP_1 | 164191 | 165081 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ECLMCPKP_48 | 6257 | 7186 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.68 | 79.52 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ECLMCPKP_48 | 6266 | 7183 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | PARTIALX | 99.67 | 78.87 | WP_008651082.1 |
| ECLMCPKP_1 | 164191 | 165078 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ECLMCPKP_1 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_2 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_3 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_4 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_5 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_6 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_7 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_8 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_9 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_10 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_11 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_12 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_13 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_14 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_15 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_16 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_17 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_18 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_19 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_20 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_21 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_22 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_23 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_24 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_25 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_26 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_27 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_28 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_29 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_30 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_31 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_32 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_33 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_34 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_35 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_36 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_37 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_38 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_39 | 1.0 | 0.0 | 1.0 |
| ECLMCPKP_40 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_41 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_42 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_43 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_44 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_45 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_46 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_47 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_48 | 1.0 | 0.0 | 1.0 |
| ECLMCPKP_49 | 0.0 | 1.0 | 0.0 |
| ECLMCPKP_50 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)