Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPLGAEOH_10 | 79254 | 80219 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JPLGAEOH_10 | 79254 | 80219 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JPLGAEOH_10 | 79257 | 80219 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JPLGAEOH_2 | 68499 | 70079 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JPLGAEOH_1 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_2 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_3 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_4 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_5 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_6 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_7 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_8 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_9 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_10 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_11 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_12 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_13 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_14 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_15 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_16 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_17 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_18 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_19 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_20 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_21 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_22 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_23 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_24 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_25 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_26 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_27 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_28 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_29 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_30 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_31 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_32 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_33 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_34 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_35 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_36 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_37 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_38 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_39 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_40 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_41 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_42 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_43 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_44 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_45 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_46 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_47 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_48 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_49 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_50 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_51 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_52 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_53 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_54 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_55 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_56 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_57 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_58 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_59 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_60 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_61 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_62 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_63 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_64 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_65 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_66 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_67 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_68 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_69 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_70 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_71 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_72 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_73 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_74 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_75 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_76 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_77 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_78 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_79 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_80 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_81 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_82 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_83 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_84 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_85 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_86 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_87 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_88 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_89 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_90 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_91 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_92 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_93 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_94 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_95 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_96 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_97 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_98 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_99 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_100 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_101 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_102 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_103 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_104 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_105 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_106 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_107 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_108 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_109 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_110 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_111 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_112 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_113 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_114 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_115 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_116 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_117 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_118 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_119 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_120 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_121 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_122 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_123 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_124 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_125 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_126 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_127 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_128 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_129 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_130 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_131 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_132 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_133 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_134 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_135 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_136 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_137 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_138 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_139 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_140 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_141 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_142 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_143 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_144 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_145 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_146 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_147 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_148 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_149 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_150 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_151 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_152 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_153 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_154 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_155 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_156 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_157 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_158 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_159 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_160 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_161 | 1.0 | 0.0 | 1.0 |
| JPLGAEOH_162 | 0.0 | 1.0 | 0.0 |
| JPLGAEOH_163 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)