Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 0 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NAMAOLGB_40 | 34575 | 35477 | CepA-29 | ARO:3006224 | CepA-29 | 99.67 | 100.00 | NG_050385.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NAMAOLGB_40 | 34575 | 35477 | cepA-29 | Unknown Beta-lactam | 99.78 | 100.00 | U05884 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NAMAOLGB_40 | 34575 | 35474 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_063865204.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NAMAOLGB_22 | 67578 | 68771 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| NAMAOLGB_22 | 67578 | 68771 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| NAMAOLGB_22 | 67578 | 68771 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NAMAOLGB_1 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_2 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_3 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_4 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_5 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_6 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_7 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_8 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_9 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_10 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_11 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_12 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_13 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_14 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_15 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_16 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_17 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_18 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_19 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_20 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_21 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_22 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_23 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_24 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_25 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_26 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_27 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_28 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_29 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_30 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_31 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_32 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_33 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_34 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_35 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_36 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_37 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_38 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_39 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_40 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_41 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_42 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_43 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_44 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_45 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_46 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_47 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_48 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_49 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_50 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_51 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_52 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_53 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_54 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_55 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_56 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_57 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_58 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_59 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_60 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_61 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_62 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_63 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_64 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_65 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_66 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_67 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_68 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_69 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_70 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_71 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_72 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_73 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_74 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_75 | 1.0 | 0.0 | 1.0 |
| NAMAOLGB_76 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_77 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_78 | 0.0 | 1.0 | 0.0 |
| NAMAOLGB_79 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NAMAOLGB_33 | 12803 | 21559 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)