Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FMIMCJLL_21 | 74931 | 75881 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| FMIMCJLL_21 | 74931 | 75881 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| FMIMCJLL_21 | 74931 | 75881 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| FMIMCJLL_21 | 74931 | 75881 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMIMCJLL_21 | 74929 | 75882 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FMIMCJLL_31 | 12403 | 10823 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMIMCJLL_1 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_2 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_3 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_4 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_5 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_6 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_7 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_8 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_9 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_10 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_11 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_12 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_13 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_14 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_15 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_16 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_17 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_18 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_19 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_20 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_21 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_22 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_23 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_24 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_25 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_26 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_27 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_28 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_29 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_30 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_31 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_32 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_33 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_34 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_35 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_36 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_37 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_38 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_39 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_40 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_41 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_42 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_43 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_44 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_45 | 1.0 | 0.0 | 1.0 |
| FMIMCJLL_46 | 1.0 | 0.0 | 1.0 |
| FMIMCJLL_47 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_48 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_49 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_50 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_51 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_52 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_53 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_54 | 1.0 | 0.0 | 1.0 |
| FMIMCJLL_55 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_56 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_57 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_58 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_59 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_60 | 0.0 | 1.0 | 0.0 |
| FMIMCJLL_61 | 1.0 | 0.0 | 1.0 |
| FMIMCJLL_62 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)