Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AJKBPBPG_44 | 17677 | 18473 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 91.47 | 99.50 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AJKBPBPG_44 | 17676 | 18473 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 89.85 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AJKBPBPG_13 | 69167 | 70747 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AJKBPBPG_1 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_2 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_3 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_4 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_5 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_6 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_7 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_8 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_9 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_10 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_11 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_12 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_13 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_14 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_15 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_16 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_17 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_18 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_19 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_20 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_21 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_22 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_23 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_24 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_25 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_26 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_27 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_28 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_29 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_30 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_31 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_32 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_33 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_34 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_35 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_36 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_37 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_38 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_39 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_40 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_41 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_42 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_43 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_44 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_45 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_46 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_47 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_48 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_49 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_50 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_51 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_52 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_53 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_54 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_55 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_56 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_57 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_58 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_59 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_60 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_61 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_62 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_63 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_64 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_65 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_66 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_67 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_68 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_69 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_70 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_71 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_72 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_73 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_74 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_75 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_76 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_77 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_78 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_79 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_80 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_81 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_82 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_83 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_84 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_85 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_86 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_87 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_88 | 0.0 | 1.0 | 0.0 |
| AJKBPBPG_89 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_90 | 1.0 | 0.0 | 1.0 |
| AJKBPBPG_91 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AJKBPBPG_24 | 19288 | 32597 | False | Myoviridae | VOG7892, |
Phigaro v2.4.0 (Database: Jan. 2024 release)