Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CPLDMDJG_11 | 118194 | 119774 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.48 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CPLDMDJG_1 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_2 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_3 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_4 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_5 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_6 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_7 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_8 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_9 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_10 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_11 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_12 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_13 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_14 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_15 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_16 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_17 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_18 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_19 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_20 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_21 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_22 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_23 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_24 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_25 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_26 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_27 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_28 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_29 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_30 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_31 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_32 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_33 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_34 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_35 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_36 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_37 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_38 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_39 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_40 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_41 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_42 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_43 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_44 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_45 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_46 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_47 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_48 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_49 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_50 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_51 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_52 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_53 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_54 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_55 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_56 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_57 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_58 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_59 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_60 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_61 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_62 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_63 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_64 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_65 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_66 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_67 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_68 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_69 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_70 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_71 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_72 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_73 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_74 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_75 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_76 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_77 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_78 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_79 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_80 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_81 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_82 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_83 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_84 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_85 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_86 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_87 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_88 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_89 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_90 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_91 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_92 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_93 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_94 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_95 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_96 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_97 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_98 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_99 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_100 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_101 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_102 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_103 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_104 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_105 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_106 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_107 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_108 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_109 | 1.0 | 0.0 | 1.0 |
| CPLDMDJG_110 | 0.0 | 1.0 | 0.0 |
| CPLDMDJG_111 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CPLDMDJG_10 | 128564 | 135417 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)