Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HGHCECKN_12 | 22097 | 22890 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 83.67 | 98.88 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HGHCECKN_12 | 22093 | 22890 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 80.83 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HGHCECKN_1 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_2 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_3 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_4 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_5 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_6 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_7 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_8 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_9 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_10 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_11 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_12 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_13 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_14 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_15 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_16 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_17 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_18 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_19 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_20 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_21 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_22 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_23 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_24 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_25 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_26 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_27 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_28 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_29 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_30 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_31 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_32 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_33 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_34 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_35 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_36 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_37 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_38 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_39 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_40 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_41 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_42 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_43 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_44 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_45 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_46 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_47 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_48 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_49 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_50 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_51 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_52 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_53 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_54 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_55 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_56 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_57 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_58 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_59 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_60 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_61 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_62 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_63 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_64 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_65 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_66 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_67 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_68 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_69 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_70 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_71 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_72 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_73 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_74 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_75 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_76 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_77 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_78 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_79 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_80 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_81 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_82 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_83 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_84 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_85 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_86 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_87 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_88 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_89 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_90 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_91 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_92 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_93 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_94 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_95 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_96 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_97 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_98 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_99 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_100 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_101 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_102 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_103 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_104 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_105 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_106 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_107 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_108 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_109 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_110 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_111 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_112 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_113 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_114 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_115 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_116 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_117 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_118 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_119 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_120 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_121 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_122 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_123 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_124 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_125 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_126 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_127 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_128 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_129 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_130 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_131 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_132 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_133 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_134 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_135 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_136 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_137 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_138 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_139 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_140 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_141 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_142 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_143 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_144 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_145 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_146 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_147 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_148 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_149 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_150 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_151 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_152 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_153 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_154 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_155 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_156 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_157 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_158 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_159 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_160 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_161 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_162 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_163 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_164 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_165 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_166 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_167 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_168 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_169 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_170 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_171 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_172 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_173 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_174 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_175 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_176 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_177 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_178 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_179 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_180 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_181 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_182 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_183 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_184 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_185 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_186 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_187 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_188 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_189 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_190 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_191 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_192 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_193 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_194 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_195 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_196 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_197 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_198 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_199 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_200 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_201 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_202 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_203 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_204 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_205 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_206 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_207 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_208 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_209 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_210 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_211 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_212 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_213 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_214 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_215 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_216 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_217 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_218 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_219 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_220 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_221 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_222 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_223 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_224 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_225 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_226 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_227 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_228 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_229 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_230 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_231 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_232 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_233 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_234 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_235 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_236 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_237 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_238 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_239 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_240 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_241 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_242 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_243 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_244 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_245 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_246 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_247 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_248 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_249 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_250 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_251 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_252 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_253 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_254 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_255 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_256 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_257 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_258 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_259 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_260 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_261 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_262 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_263 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_264 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_265 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_266 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_267 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_268 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_269 | 1.0 | 0.0 | 1.0 |
| HGHCECKN_270 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_271 | 0.0 | 1.0 | 0.0 |
| HGHCECKN_272 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HGHCECKN_1 | 153021 | 176836 | False | Siphoviridae | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)