Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PFMGDENK_15 | 53681 | 52101 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PFMGDENK_1 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_2 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_3 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_4 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_5 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_6 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_7 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_8 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_9 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_10 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_11 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_12 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_13 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_14 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_15 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_16 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_17 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_18 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_19 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_20 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_21 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_22 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_23 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_24 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_25 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_26 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_27 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_28 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_29 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_30 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_31 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_32 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_33 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_34 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_35 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_36 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_37 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_38 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_39 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_40 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_41 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_42 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_43 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_44 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_45 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_46 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_47 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_48 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_49 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_50 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_51 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_52 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_53 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_54 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_55 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_56 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_57 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_58 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_59 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_60 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_61 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_62 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_63 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_64 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_65 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_66 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_67 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_68 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_69 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_70 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_71 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_72 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_73 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_74 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_75 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_76 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_77 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_78 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_79 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_80 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_81 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_82 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_83 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_84 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_85 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_86 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_87 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_88 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_89 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_90 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_91 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_92 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_93 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_94 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_95 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_96 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_97 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_98 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_99 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_100 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_101 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_102 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_103 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_104 | 1.0 | 0.0 | 1.0 |
| PFMGDENK_105 | 0.0 | 1.0 | 0.0 |
| PFMGDENK_106 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)